Rui Lebre
PhD Student @ University of A Coruña
Researcher @ IEETA
Rui Lebre interests in engineering start in the early ages and converged to the computer fields when he was sixteen years old. Two years later, he opened the door to the project of his life, starting the academic path that lead to his Masters degree. During the masters at University of Aveiro, Portugal, his interests for medical informatics and medical software got higher and in 2016 he started the colaborations with UA.PT Bioinformatics. His first project as a junior researcher was to develop a web DICOM viewer for Digital Pathology. Moreover, among other small side projects, he started the development of a Role-Based Access Control for general Picture Archiving and Communication Systems.
Rui now leverages his experience and knowledge exploring profile-based, decentralized and blockchain systems to improve the nowadays healthcare systems. In the meantime he oriented some masters students and junior researchers in their investigation.
This site was generated using HUGO from an open source theme via a CircleCI.
Skills
- API Management Platforms
- Webservices
- Java
- Python
- Javascript
- NodeJS
- Angular
- Django
- Git
- Maven
- npm
- SQL Server
- MySQL
- Windows
- Linux
- MacOS
- Portuguese
- English
- (learning the first steps) German
Publications
A collection of articles, presentations or talks, most likely on Conferences and Journals.
Journal
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Micael Pedrosa, Rui Lebre and Carlos Costa (2022). An architecture to secure medical imaging in federated storage. Expert Systems with Applications (Submitted; Under review).
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Rui Lebre, Luís Bastião Silva and Carlos Costa (2022). Dicoogle Open Source: the establishment of a new paradigm in medical imaging. Journal of Medical Systems (Submitted; Under review).
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Micael Pedrosa, Rui Lebre and Carlos Costa (2021). A performant protocol for distributed health records databases. IEEE Access (Accepted on August 2021).
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Rui Lebre, Luís Bastião and Carlos Costa (2020). A Cloud-ready Architecture for Shared Medical Imaging Repository. Journal of Digital Imaging 2020 (Accepted on June 2020).
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Tiago Godinho, Rui Lebre, João Almeida and Carlos Costa (2019). ETL Framework for Real-Time Business Intelligence over Medical Imaging Repositories. Journal of Digital Imaging (IF: 1.536, Q3 in Radiology, Nuclear Medicine and Medical Imaging).
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Tiago Godinho, Rui Lebre, Luís Bastião Silva and Carlos Costa. (2017). An efficient architecture to support digital pathology in standard medical imaging repositories. Journal of Biomedical Informatics (IF: 2.753, Q1 in Computer Science, Interdisciplinary Applications).
Book Chapter
- Rui Lebre, Rui Jesus, Pedro Nunes and Carlos Costa (2021). Pathobox: The Collaborative Tele-pathology Platform with Access Management. Communications in Computer and Information Science (Accepted on March 2021).
Conference
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Rui Lebre and Carlos Costa (2021). An efficient and reliable architecture for distributing medical imaging data. IEEE EHB 2021 (Accepted on October 2021)
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Micael Pedrosa, Rui Lebre and Carlos Costa (2021). Holder-of-key threshold access token for anonymous data resources. IEEE ISCC 2021 (Accepted on July 2021).
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Rui Lebre, Luís Bastião Silva and Carlos Costa (2021). Decentralizing the storage of a DICOM compliant PACS. IEEE BIBM 2021 (Accepted on June 2021).
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Rui Lebre and Carlos Costa (2021). A non-relational approach for distributed medical imaging databases. IEEE BHI-BSH 2021 (Accepted on June 2021).
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Rui Lebre, Micael Pedrosa, Marcos Gestal and Carlos Costa (2020). A safe architecture for authorisation grant in healthcare ecosystems. ICHI 2020 (Accepted on April 2020).
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Rui Lebre, Eduardo Pinho, Jorge Silva and Carlos Costa (2020), Dicoogle Framework for Medical Imaging Teaching and Research. IEEE ICTS4eHealth 2020 (Accepted on February 2020).
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Ana Almeida, Francisco Oliveira, Rui Lebre and Carlos Costa (2020). NoSQL distributed database for DICOM objects. ICHI 2020 (Accepted on January 2020).
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Rui Jesus, Pedro Nunes, Rui Lebre and Carlos Costa (2020). Role-based architecture for securemanagement of telepathology sessions. MIE 2020 (Accepted on December 2019)
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Pedro Nunes, Rui Jesus, Rui Lebre and Carlos Costa (2020). Data and sessions management in a telepathology platform. Healthinf 2020 (Accepted on December 2019)
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Fátima Solange and Rui Lebre (2019). Automated pattern recognition of cerebral amyloid angiopathy patients. RecPad 2019 (Accepted on October 2019).
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Rui Lebre, Rui Jesus, Pedro Nunes and Carlos Costa (2019). Collaborative Framework for a Whole-Slide Image Viewer. IEEE CBMS 2019 (Accepted on April 2019).
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Rui Lebre, Luís Bastião and Carlos Costa (2019). An Accounting Mechanism for Standard Medical Imaging Services. IEEE EMBS 2019 (Accepted on December 2018).
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Rui Lebre, Tiago Godinho, Carlos Costa and Luis Silva. (2018). A performant and fully DICOM compliant Web PACS for Digital Pathology. CARS 2018 (Accepted on February 2018).
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Rui Lebre, Luís Bastião Silva and Carlos Costa. (2018). Shared Medical Imaging Repositories. MIE 2018 (Accepted on January 2018).
Experience
Researcher
Development and maintainance of the Dicoogle project, aiming to increase the success of the platform among other research units, academic institutions or in healthcare industry.
Intern
Development of the Master thesis in a company environment.
Junior Researcher
Engineering and development of a world’s pioneer system targeting to support Digital Pathology(whole-slide Images) in the format of the DICOM standard in general medical imaging repos-itories. The challenge was dealing with several gigapixels images not only in the medicalimages repositories but also in the web-based viewer.
Collaborator
Contacting former students under the study “Follow-up of the UA graduated students, between2008 and 2011, working conditions”
Collaborator
Working in a project as ambassador of the University of Aveiro, promoting the institutions inPortuguese high schools
Collaborator
Contacting former students under the study “The employability of the UA graduated studentsbetween 2012 and 2014”